CDS

Accession Number TCMCG016C25590
gbkey CDS
Protein Id OMO55692.1
Location complement(join(3608..3703,3945..4004,4160..4278,4356..4454,4585..4768,4844..4940,5031..5089,5169..5292,5427..5551,5659..5813,5924..6170,6320..6447,6755..6818,6923..7018,7107..7301,7413..7733,7903..8293,8434..8497,8884..8987,9096..9187,9315..9368,9480..9564,9727..9857,11076..11117))
Organism Corchorus capsularis
locus_tag CCACVL1_27078

Protein

Length 1043aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01014583.1
Definition hypothetical protein CCACVL1_27078 [Corchorus capsularis]
Locus_tag CCACVL1_27078

EGGNOG-MAPPER Annotation

COG_category U
Description Transducin WD40 repeat-like superfamily protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K08518        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000149        [VIEW IN EMBL-EBI]
GO:0002791        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005096        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0008047        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0017016        [VIEW IN EMBL-EBI]
GO:0017075        [VIEW IN EMBL-EBI]
GO:0017137        [VIEW IN EMBL-EBI]
GO:0017157        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019905        [VIEW IN EMBL-EBI]
GO:0030141        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0030695        [VIEW IN EMBL-EBI]
GO:0031267        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043087        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043547        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045921        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050708        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051046        [VIEW IN EMBL-EBI]
GO:0051047        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051223        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0060589        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070201        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090087        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0099503        [VIEW IN EMBL-EBI]
GO:1903530        [VIEW IN EMBL-EBI]
GO:1903532        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTTGTTAAGAAGCTCCTGGTGGAGAAGGCCTCCAAGAAGCCTGGAGGAATTTCTGATGCTTTGAAAGCTAGTGATGTAGACCCACATTTGGTATTTCATTATGGGATCCCATTGGGTTGTTGTATGTTTGCTTATGATTCCCTTCAAAAGATACTTGCAATTTCTACTATAGATGGCAGAATTAAACTCTTTGGAAGAGATAACTCTCAAGCTCTTCTTGAATCTGATGATGCAGTCCCAAGCAAGTTTCTGGAGTTCATCCAGAACCAAGGCATCCTTGTAAATGTAAATTTGATGAATCATATTGAGGTTTGGGATTTGGACAAGAAGCTGTTGTCTCATGTACATGTCTTCAAAGAAGAAATTACTTCTTTCACAGTTATGCAGAGTGGTTCCTACATATATGCTGGGGATTCTGTTGGCAACATTAAGGTTTTGAAGATTGACCAAGAGCTAGGTCATGTTGTACAAATGAAATACATTATACCTTTCTCAGCTTCTCATGGAAATCCGACGGAAGTTTCAGCTGTTGTCTCCATAATGCCTCAACCAACAGCAGAAAGCAAAAGAATTCTTTTAATCTTTAAAGACGGCTTCATCACTTTGTGGGAAATTAGAGAGAGCAAAGCTATTTTGGTTACAGGTGGCAGTATGTTCCAATCAGTAAATAGTGAAGCAAAGCATGTGACTTCTGCATGCTGGGTATGCCCTTTTGGTAGTAAGGTTGCTGTTGGTTACAGTAATGGAGAAATTCTCATATGGAGTGTTCCTACCTCAAAGCTAAATAACGAACCCGCATCCGAAAGTAGCATTCAAAATGCTCCAATTTGTAAACTCATTCTTGGATTTAGATCAGATAAGATTCCGATAACATGGTTAAAATGGTCCTATGCCGATGCAAAAGCCACCAGACTATATGTCATGGGTGCCTCTGATGTAGCCTCCACAAGCATGCTGCAGGTGGTCTTATTGAACGAGCATACTGAATCTCGCACCATTAAGCTTGGGCTTCATTTGACTGAGCCTTGTGTAGACATGGTGATCACTTCAACAAGTACCGAGCAAAGCAAAGTTAGAGAAGATTTTCTCCTCTTGATTGGAAAATCAGGAAAAATTTATATGTATGATGATTGCTCAATTGAGAGGTATCTTCTGCATTGCCAATCAAGGTCACCGCCTTCCCTCCCAAAGGAGGTAATGCTGAAGATGCCGTTTGCAGATTCAAACATCACAGTAGCTAAACTAATTACTGACAACCCTAATGCGTTAAGTTCGGATGTGGATTACACTCTTCTTTCCAAGGATATTCCATCACTTGTTCCCTTGGAGACAAAGCCAAAAGATGGATGTCACTACCAATTTAGTGGTTTTGGCAAGGTAAAAAACCTGTACATAACCGGACACAGTGATGGAGCCATCAATTTTTGGGATTTATCATGCTCCTTTCCTATACCAGTTCTGTCATTAAAGCAACAGAGCGAAGATAATTTTTCTTTGAGTGGTGTAGCTCTGTCTGCGTTGTATTTTGATAGAGACTCTCGGATTCTAGTTTCTGGTGACCAGAGTGGAATGGTTCGCATCTTTCAGTTTAAGGCAGAGCCATATACAACAGACAACAGTTTCATTTCTTTCCAAGTAAGCTCAAAGAAAGGGAATAATCACGTTATCCAGAGTCTTAAGGTCCTTAAAGTTAATGGTTCTGTACTCTCTCTAAACATAAGTCACAGCACAAGCTATCTTGCCATTGGGTCTGATCAAGGAGACGTTTCACTAGTTGACATGCAAGGTCCCAGTGTCATATTTCAAAGTCATATTGCAAGTGATATCTGTCCTGGCATCATTTCACTGCAGTTTAAAACCTGTAGTCTGCAAAATTTTGAAAAGAATGTTCTGGTGGCTGCTATGAAGGATTCATCAGTTTGGGCCTTTGACAGTAATACCGGAAACATGCTGACTACTAGCATGGTTCGCCCGAAGAAACCCTCAAGAGCTCTATTTATGCAGATTTTGGATTGGCAGGATTTGTTGGTTAGGGGAGCAAATATGTCAAATAGTCCAGACACAAGCAGAGGGAGTCCTGTTGAGGAAGGCATATCAAAGCAATCATACATACTGATATGTTCGGAGAAGGCTGCATATGTCTATTCCTTGATTCATGCTATTCAGGGAGTCAAAAAGGTGCACTACAAGAAGAAGTTTAATTCCACTTCTTGCTGCTGGGCATCAACATTTCATACCGCCACCGATGTTGGCCTTATGCTCCTCTTCACTAGTGGAAAAGTTGAAATAAGGTCCTTGCCAGAGTTATCCTTGTTGAAGGAAACTTCAATCAGAGGTCTCAGATATTCTACACCGAAGCAAAACTCATCATCCGACAACTCAATTGGCTTTTCAAACTGTGGAGATTTTGTAATGGTTAACGGGGATCAAGAACTCTTTATTGTCTCAGTTTTGCTCCAGAAGGAAAGTTTTAGGATTCTGGACTCTATCAGCCGTGTCTATAGGAAAGAGTTGATGCTTTCACAGGAAGTGCTTGCCTCTGGAACCACGATTCAGAAGGAGAAGAAGAAGGGAATTTTCGGGTCTGTTCTCAAAGACATAACAGGCAGTAAAAAGAATGTCCATGTGCATGAAGCGGAGACAGAAGATACGAAAGAAAGTATTGAAGAACTTTTGACCATCTTTTCAACTGCTAATTTTCCGTCTGAGGTTGAAAATAGAGATAATCAGGAAGATGATTTTGATTTAGACATTGATGATATTGACCTTGATGATTCTGGAGAGAAACCCAAAGAACACAACATTTTAGCAGCTCTTAATAAGCACAAGCTTAAATTTCAGGCTTTTACAGCAGGTAAATTAAAACAGATGAAGTCAAAAAATGATAAACCAATCGCCAAAGAAGAGCAGCAAGATGAGAAGTCCAGTGCTGTTGATCAAATCAAGAAAAAATACGGCTTTTCTTCCCAGGGTGAATCAAGTGCTGCTAAAATGGCAGAAAACAAGCTTCATGAAAATTTGAGAAAATTGCAGGGAATCAGCTTGAAAACCACAGAGATGCAAGACACTGCAAAATCATTCTCTTCAATGGCAAGAGAACTACTACGTACTACAGAACAAGACAAGTGA
Protein:  
MFVKKLLVEKASKKPGGISDALKASDVDPHLVFHYGIPLGCCMFAYDSLQKILAISTIDGRIKLFGRDNSQALLESDDAVPSKFLEFIQNQGILVNVNLMNHIEVWDLDKKLLSHVHVFKEEITSFTVMQSGSYIYAGDSVGNIKVLKIDQELGHVVQMKYIIPFSASHGNPTEVSAVVSIMPQPTAESKRILLIFKDGFITLWEIRESKAILVTGGSMFQSVNSEAKHVTSACWVCPFGSKVAVGYSNGEILIWSVPTSKLNNEPASESSIQNAPICKLILGFRSDKIPITWLKWSYADAKATRLYVMGASDVASTSMLQVVLLNEHTESRTIKLGLHLTEPCVDMVITSTSTEQSKVREDFLLLIGKSGKIYMYDDCSIERYLLHCQSRSPPSLPKEVMLKMPFADSNITVAKLITDNPNALSSDVDYTLLSKDIPSLVPLETKPKDGCHYQFSGFGKVKNLYITGHSDGAINFWDLSCSFPIPVLSLKQQSEDNFSLSGVALSALYFDRDSRILVSGDQSGMVRIFQFKAEPYTTDNSFISFQVSSKKGNNHVIQSLKVLKVNGSVLSLNISHSTSYLAIGSDQGDVSLVDMQGPSVIFQSHIASDICPGIISLQFKTCSLQNFEKNVLVAAMKDSSVWAFDSNTGNMLTTSMVRPKKPSRALFMQILDWQDLLVRGANMSNSPDTSRGSPVEEGISKQSYILICSEKAAYVYSLIHAIQGVKKVHYKKKFNSTSCCWASTFHTATDVGLMLLFTSGKVEIRSLPELSLLKETSIRGLRYSTPKQNSSSDNSIGFSNCGDFVMVNGDQELFIVSVLLQKESFRILDSISRVYRKELMLSQEVLASGTTIQKEKKKGIFGSVLKDITGSKKNVHVHEAETEDTKESIEELLTIFSTANFPSEVENRDNQEDDFDLDIDDIDLDDSGEKPKEHNILAALNKHKLKFQAFTAGKLKQMKSKNDKPIAKEEQQDEKSSAVDQIKKKYGFSSQGESSAAKMAENKLHENLRKLQGISLKTTEMQDTAKSFSSMARELLRTTEQDK